Third Challenge Winners

Task 3a: Large-scale online biomedical semantic indexing

The teams that topped the competition for each batch were:
 
Batch 1
  First place Second place
Flat / Hierarchical Measures Fudan AUTH-Atypon

Batch 2
  First place Second place
Flat / Hierarchical Measures Fudan BMI-UKY

Batch 3
  First place Second place
Flat / Hierarchical Measures Fudan AUTH-Atypon

 

Teams (Task 3a):
  • AUTH-Atypon team: Yannis Papanikolaou, Grigorios Tsoumakas, Manos Laliotis, Nikos Markantonatos and Ioannis Vlahavas
    (AUTH: Aristotle University of Thessaloniki)
  • Fudan team: Shengwen Peng, Shanfeng Zhu
  • BMI-UKY team: Anthony Rios and Ramakanth Kavuluru
    (BMI-UKY: Division of Biomedical Informatics, University of Kentucky)

 

Results at: 

http://participants-area.bioasq.org/results/3a/

Task 3b: Biomedical Semantic QA

PHASE A
    BATCH 1 BATCH 2 BATCH 3 BATCH 4 BATCH 5
DOCUMENTS 1st SNU Fudan USTB USTB Fudan
(SELECION STRATEGY: MAP) 2nd USTB SNU SNU SNU USTB
SNIPPETS 1st HPI IIIT CMU Fudan Fudan
(SELECION STRATEGY: MAP) 2nd USTB USTB USTB CMU USTB
CONCEPTS 1st HPI HPI CMU CMU CMU
(SELECION STRATEGY: MAP) 2nd USTB USTB HPI HPI HPI

PHASE B
    BATCH 1 BATCH 2 BATCH 3 BATCH 4 BATCH 5
EXACT 1st TTI TTI TTI/ Fudan CMU CMU
(SELECTION STRATEGY: AVG RANKING IN THREE TYPES: Y/N-ACC, FACT-MRR, LIST MEAN F-MEASURE) 2nd Fudan Fudan - TTI Fudan
IDEAL 1st SNU SNU SNU SNU SNU
(SELECTION STRATEGY: MEAN MANUAL SCORE) 2nd HPI Fudan Fudan Fudan Fudan

 
Teams (Task 3b):
  • Fudan team:  Ronghui You, Zhikai Xie, Beichen Wang, Yanchun Zhang and Shanfeng Zhu       (Fudan: Fudan University, China)
  • CMU team: . Zi Yang, Niloy Gupta, Xiangyu Sun, Di Xu, Chi Zhang and Eric Nyberg (CMU:Carnegie Mellon University, Language Technologies Institute, School of Computer Science)
  • HPI team: Mariana Neves                                                                                                             ​(HPI: Hasso-Plattner-Institute at the University of Potsdam, Germany)
  • USTB team: Zhi-Juan Zhang, Tian-Tian Liu, Bo-Wen Zhang, Yan Li, Chun-Hua Zhao, Shao-Hui Feng, Xu-Cheng Yin and Fang Zhou                                                                           (USTB: University of Science and Technology Beijing ,Department of Computer Science and Technology)
  • SNU team: Sungbin Choi                                                                                                                       (SNU: Department of Biomedical Engineering, Seoul National University, Republic of Korea)
  • TTI team: Kota Makise and Yutaka Sasaki                                                                                 (TTI: Toyota Technological Institute)
  • IIIT team: Harish Yenala, Avinash Kamineni, Manish Shrivastava and Manoj Chinnakotla     (IIIT: International Institute of Information Technology Hyderabad, India)